Like the Pokémon Ranger game that preceeded: Shadows of Almia, this game also has a variety of missions for you to play through after you have completed everything in the main game. Like the previous game, these missions are to be given over the Nintendo Wi-Fi Connection and as such, are only likely to be available for a limited time. These missions are likely to encompass both missions where you get prizes to transfer and standard missions that expand the game's storyline. Below is a list of the missions and what you have to do within them;

Deoxys and the Odd Temple
Release Dates:

Japan: March 6th 2010 to May 17th 2010
America: October 4th 2010 to January 11th 2011
Europe: November 5th 2010 to January 11th 2011

Locations: Odd Temple

Details:
This mission requires you to travel to the past and select it there. Takes place in the Odd Temple and needs two or more people to play due to the multi-person switches required to get past the second room. 3.5 Star, 09:00 Recommended Level 25. Requires you to capture 5 Ninetales. The Ninetales are frightened so will run away from you at first sight. Your best bet here is to lay an ambush with your friend and chase the Ninetales into them. Normal Form shoots Energy Balls out and will occassionally disappear and re-appear in the middle to change form. When it transforms into Defense Form, it creates a barrier around itself and shoots Energy Balls in any direction. Speed Forme creates illusions of itself to distract you. Attack Forme creates energy beams going out in multiple directions. . Once you have defeated it, you have the ability to transfer it to your Diamond, Pearl, Platinum, HeartGold or SoulSilver games

This mission only has multiplayer functionality, so you can only do it when you are playing with friends. Each mission has a group leader and the group leader is the only one to download the Deoxys for that mission and the form of Deoxys received depends entirely upon how the mission goes.

Normal Forme
Defeat mission with less than 1 minute remaining
Deoxys
Deoxys
Level 50
OT: Oblivia Trainer Memo:
??? Nature.
Date of Obtaining
Pokémon Ranger. Apparently had a fateful encounter at Lv. 50
Attacks:
Psycho Boost
Leer
Wrap
Night Shade
Ribbons:
???
ID No: 03060
Hold Item:
None
 
Attack Forme
Defeat mission with 5 minutes or more remaining
Deoxys
Deoxys
Level 50
OT: Oblivia Trainer Memo:
??? Nature.
Date of Obtaining
Pokémon Ranger. Apparently had a fateful encounter at Lv. 50
Attacks:
Psycho Boost
Meteor Mash
SuperPower
Hyper Beam
Ribbons:
???
ID No: 03060
Hold Item:
None
 
Defence Forme
Defeat mission with between 3 & 5 minutes remaining
Deoxys
Deoxys
Level 50
OT: Oblivia Trainer Memo:
??? Nature.
Date of Obtaining
Pokémon Ranger. Apparently had a fateful encounter at Lv. 50
Attacks:
Psycho Boost
Detect
Counter
Mirror Coat
Ribbons:
???
ID No: 03060
Hold Item:
None
 
Speed Forme
Defeat mission with between 1 & 3 minutes remaining
Deoxys
Deoxys
Level 50
OT: Oblivia Trainer Memo:
??? Nature.
Date of Obtaining
Pokémon Ranger. Apparently had a fateful encounter at Lv. 50
Attacks:
Psycho Boost
Swift
Double Team
ExtemeSpeed
Ribbons:
???
ID No: 03060
Hold Item:
None
 
Protect the Blue Sphere!
Release Dates:

Japan: March 6th 2010 to May 17th 2010
America: October 4th 2010 to January 11th 2011
Europe: November 5th 2010 to January 11th 2011

Locations: Renbow Island - Coral Sea

Details:
The second WiFi mission features the Pokémon Ranger staple, the Manaphy Egg. In this mission, the Girl will tell you at Booker's House that a Manaphy Egg has appeared near the sea. However, on investigation, two shadows come up and take the Egg away. Pokémon Napper appears with a Poochyena and follows it, leaving you with the Poochyena to capture. You follow them into Coral Sea. The Pokémon Napper gets the egg but quickly goes deeper into the sea. You have to chase the Pokémon Napper in a current. Follow him down and he'll send a Carvanha at you. After capturing the Carvanha, he'll drop the Egg which leads to an Underwater Chase which features Tentacool as an obstacle going up, Mantyke as one going down and a Qwilfish which will appear and puff up. Once you get it, the mission will end and you will have the ability to send the Manaphy Egg to your

Egg
Manaphy Eggg
Trainer Memo:
Date of Obtaining
Egg Received by Pokémon Ranger.
Investigate the Odd Eruption!
Release Dates:

Japan: March 18th 2010 to May 17th 2010
America: October 14th 2010 to January 11th 2011
Europe: November 28th 2010 to January 11th 2011
Locations: Faldera Island - Faldera Volcano

Details:
The third WiFi mission features the Pokémon Heatran. In the mission, you get notified of massive eruptions in a volcano in Oblivia which has been disturbing the nearby tourists. Your task is to investigate the cause. First, head up and see girl harassed by 2 Charmeleon. Next bit round up four Bidoof from around the Lava Pools. After that, you hear an explosion and go east and you'll see Heatran creating lava pools. Follow it into the Volcano. Follow the volcano all the way up to Moltres' nest and you'll spot it. Heatran will send small bolts of magma out as well as large fire balls. After it rages, it will start creating massive lava pools on the floor and will then send balls of rock into the air which will fall down all over the stage causing damage

Heatran
Heatran
Level 50
OT: Oblivia Trainer Memo:
Quiet Nature.
Date of Obtaining
Pokémon Ranger. Apparently had a fateful encounter at Lv. 50
Attacks:
Eruption
Magma Storm
Earth Power
AncientPower
Ribbons:
???
ID No: 03060
Hold Item:
None
 
Rescue the Lost Shaymin!
Release Dates:

Japan: March 18th 2010 to May 17th 2010
America: November 15th 2010 to January 11th 2011
Europe: November 15th 2010 to January 11th 2011

Locations: Renbow Island - Latolato Trail

Details:
The fourth WiFi mission features the Pokémon Shaymin. In the mission, you get notified that a Shaymin has arrived in Oblivia. Naturally, the Pokémon Nappers are eager to capture Shaymin. In this mission, Leira tells you she heard some rustling in the bushes outside. Go outside and you'll find Shaymin whom will run off. You and Rand go and follow it. There are several small bouquets similar to Shaymin in the area. You need to go interact with the right one and Shaymin will awaken and run off into the adjacent Flower garden. You'll get into a battle with Shaymin. It creates small Frenzy Plants everywhere and creates small shockwaves around it. After capturing, the Pokémon Nappers will arrive. Shaymin transforms into Sky Forme and flies off with the Pokémon Nappers chasing. You then get into an mid-air chase and have to avoid the Energy Balls the Pokémon Nappers shoot at you. Get through it and Shaymin will challenge you in its Sky Forme. As it's an in-air battle, the only assist you have it Latios/Latias' assist but luckily Shaymin will not make contact with the line. It has an Air Slash style attack where it shoots multiple slices out and an attack where it sends out a circle of leaves around it. Finally, it will make a small shockwave around it that will damage your styler. Capture it and Shaymin will be cheered up and the mission will end. Capture the Shaymin and you can transfer it to your main games. This Shaymin can also activate the Gracidea in Platinum, HeartGold & SoulSilver

Shaymin
Shaymin
Level 30
OT: Oblivia Trainer Memo:
??? Nature.
Date of Obtaining
Pokémon Ranger. Apparently had a fateful encounter at Lv. 30
Attacks:
Defense Curl
Magical Leaf
Leech Seed
Synthesis
Ribbons:
???
ID No: 03060
Hold Item:
None
 
Find Giratina's Griseous Orb!
Release Dates:

Japan: April 15th 2010 to ??
America: ??
Europe: ??

Locations: Sophian Island - Oblivia Ruins

Details:
The fifth WiFi mission features the Pokémon Giratina. It has you go to Oblivia Ruins with Leira. There are numerous Pokémon around to capture so go around and capture the ones you feel will be helpful such as Umbreon and Gengar. Go to the main room with Leira. Giratina will appear and challenge you in its Altered Forme. It will create some ghostly balls on the ground that can interefre. It also has an attack that sends out these balls towards you. Another attack it has involves it sending out small beams of dark energy around the arena. Avoiding these beams should be relatively simple. When you capture the Giratina, the true mission begins. Head to the other part of the ruins and you'll find a Yoroibito guard. Follow him and you'll see he gets kidnapped by two Claydol. You will find him right near the main entrance to the ruins and he will reveal his identity as a Pokémon Napper. Speak to him and you'll all go to the hallway where the statues are. Leira will go up to one and activate a teleport that takes her away, with you quickly jumping in.
You get taken to a new part of the Oblivia Ruins and will be challenged by two Magnezone. Capture them, and Leira will collect the Griseous Orb from the stature. Return to the room you previously battle Giratina in and Leira will give Giratina the Griseous Orb and thus it'll change form. It'll challenge you. Like the Altered Form, it will place down several ghostly balls on the ground. One of its attacks will send a massive wave of these balls across the arena. After it rages, it will begin shooting out small projectiles of blue flames that will cause significant damage if they hit. Capture it and the mission ends.

Unlike the four previous missions, you cannot transfer Giratina to your Diamond, Pearl, Platinum, HeartGold & SoulSilver games

Pledge to Arceus
Release Dates:

Japan: April 15th 2010 to ??
America: ??
Europe: ??

Locations: Oblivia Region - Sky Fortress

Details:
The final WiFi mission features the Pokémon Arceus. It starts off in the observation deck of the Sky Fortress with Rand, Leira, Murph and Professor Hastings. You and Natsuya/Minami will be called to assist. You will have to go to the three other observation decks to fight and capture the Legendary Dragons. On the leftside is Giratina in its Origin Forme. Its moves are the same as before. Go to the top room and you'll discover Dialga. Dialga will quickly disappear and bring a variety of Pokémon here. You must get to them within a minute and capture them all and get to the room with Dialga in. It will challenge you as soon as you enter the room. Dialga has varied attacks including a motional Hyper Beam. It will also send out loads of small energy projectiles. Once it rages, it will sometimes teleport to the middle, draw power and send a few massive shockwaves through the arena. Once captured, you will find Rand unconscious outside the room, wake him up and he'll inform you there's just one left to go.
Go to the right hand room and Palkia will be there. Like the Pokémon Napper admin before, it will change the room to a cloud style. Should you fall, you will land back in Rand's house. Go downstairs and you'll end up back in the Sky Fortress. Get to the end of the cloud maze and you'll challenge Palkia. His attacks include making two energy balls surround him. Like the other two Pokémon, it will send out multiple projectile flames at once. Once it rages, it will sometimes teleport to the middle of the screen and send in a massive amount of energy beams from all directions.
Once captured, head back to the main observation deck and Arceus will come down and show you about its mistreatment in the past. Purple Eye will then appear and try to calm Arceus, but Arceus soon attempts to hit Purple Eye with lightning. You will try to capture it, but suffere the same fate. However, the three dragons soon appear and calm Arceus down and so you can now capture it. Its attacks are similar to its attacks in the past mission. it will create three energy balls to surround it to help hinder your progress at capturing. It will also send out a multitude of energy balls against you and will call down many energy beams from the ceiling to hit you. These beams will either be sent out in a wave or will just fall down around Arceus. After it has raged, it will also have an attack that will send massive meteors down onto the arena causing catastrophic damage if they hit. Capture it and the mission is over.

Unlike the four previous missions, you cannot transfer Arceus to your Diamond, Pearl, Platinum, HeartGold & SoulSilver games