From time to time, when you collect Pokémon Toys, you will find that several with have a Prefix. This prefix tells you the special ability of the Pokémon. There are a couple of dozen special abilities in this game, all with a variety of effects. These are all signified by Pink on the Pokémon list.
| Ability Name | Effect |
| Normal Guard | Reduces damage from Normal typed attacks |
| Bug Guard | Reduces damage from Bug typed attacks |
| Dark Guard | Reduces damage from Dark typed attacks |
| Dragon Guard | Reduces damage from Dragon typed attacks |
| Electric Guard | Reduces damage from Electric typed attacks |
| Fighting Guard | Reduces damage from Fighting typed attacks |
| Fire Guard | Reduces damage from Fire typed attacks |
| Flying Guard | Reduces damage from Flying typed attacks |
| Ghost Guard | Reduces damage from Ghost typed attacks |
| Grass Guard | Reduces damage from Grass typed attacks |
| Ground Guard | Reduces damage from Ground typed attacks |
| Ice Guard | Reduces damage from Ice typed attacks |
| Poison Guard | Reduces damage from Poison typed attacks |
| Psychic Guard | Reduces damage from Psychic typed attacks |
| Rock Guard | Reduces damage from Rock typed attacks |
| Steel Guard | Reduces damage from Steel typed attacks |
| Water Guard | Reduces damage from Water typed attacks |
| Attack | Boosts Attack by 50% |
| Defence | Boosts Defence by 50% |
| Toughness | Boosts Hit Points |
| Nature Healing | Heals HitPoints by 1% a second |
| Speedy | Boosts Movement Speed |
| Quick Act | Attacks take less time to power up |
| Stubbornness | Cannot be afflicted with any status condition |
| Restoration | Heals from status conditions quickly |
| Clean Hit | Boosts Critical Hit ratio by 50% |
| Knockout | Considerably boosts Critical Hit ratio |
| Gorgeous | Causes Pokémon to drop more money |
| Tactician | Boosts strength of low strength attacks by double |
| Blow Away | Blow's opponents further away when hit |
| Feel Good | Does not get blown back when attacked |
| Mood Maker | Boosts Allies strength in multiplayer |
| Fan Club | Boosts User & Allies strength in multiplayer |
| Information Club | Boosts User & Allies strength in multiplayer |
| Pokémon Sunday | Boosts User & Allies strength in multiplayer |